Acidicapsa

Genus of bacteria

Acidicapsa
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Acidobacteriota
Class: "Acidobacteriia"
Order: Acidobacteriales
Family: Acidobacteriaceae
Genus: Acidicapsa
Kulichevskaya et al. 2012[1]
Type species
Acidicapsa borealis
Kulichevskaya et al. 2012
Species
  • A. acidiphila[2]
  • A. acidisoli
  • A. borealis
  • A. dinghuensis
  • A. ferrireducens[3]
  • A. ligni

Acidicapsa is a bacterial genus from the family of Acidobacteriaceae.[1][4][5]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[6]

16S rRNA based LTP_08_2023[7][8][9] 120 marker proteins based GTDB 08-RS214[10][11][12]
Acidicapsa

A. acidiphila Falagán, Foesel & Johnson 2017

A. ferrireducens Falagán, Foesel & Johnson 2017

A. dinghuensis Ou-yang, Xia & Qiu 2018

A. acidisoli Matsuo et al. 2017

A. borealis Kulichevskaya et al. 2012

A. ligni Kulichevskaya et al. 2012

See also

References

  1. ^ a b c A.C. Parte; et al. "Acidicapsa". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
  2. ^ Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M. (eds.). "Nomenclature Abstract for Acidicapsa acidiphila Falagán et al. 2017". The NamesforLife Abstracts. doi:10.1601/nm.30113 (inactive 2024-04-17).{{cite journal}}: CS1 maint: DOI inactive as of April 2024 (link)
  3. ^ Falagán, C; Foesel, B; Johnson, B (May 2017). "Acidicapsa ferrireducens sp. nov., Acidicapsa acidiphila sp. nov., and Granulicella acidiphila sp. nov.: novel acidobacteria isolated from metal-rich acidic waters". Extremophiles: Life Under Extreme Conditions. 21 (3): 459–469. doi:10.1007/s00792-017-0916-4. PMID 28229259. S2CID 254082524.
  4. ^ "Acidicapsa". www.uniprot.org.
  5. ^ Parker, Charles Thomas; Garrity, George M (2012). Parker, Charles Thomas; Garrity, George M. (eds.). "Nomenclature Abstract for Acidicapsa Kulichevskaya et al. 2012". The NamesforLife Abstracts. doi:10.1601/nm.23202 (inactive 2024-04-17).{{cite journal}}: CS1 maint: DOI inactive as of April 2024 (link)
  6. ^ Sayers; et al. "Acidicapsa". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
  7. ^ "The LTP". Retrieved 20 November 2023.
  8. ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
  9. ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  10. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  11. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  12. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

Further reading

  • Kulichevskaya, I. S.; Kostina, L. A.; Valaskova, V.; Rijpstra, W. I. C.; Sinninghe Damste, J. S.; de Boer, W.; Dedysh, S. N. (19 August 2011). "Acidicapsa borealis gen. nov., sp. nov. and Acidicapsa ligni sp. nov., subdivision 1 Acidobacteria from Sphagnum peat and decaying wood". International Journal of Systematic and Evolutionary Microbiology. 62 (Pt 7): 1512–1520. doi:10.1099/ijs.0.034819-0. PMID 1856984.
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Prokaryotes: Bacteria classification
Domain
Archaea
Bacteria
Eukaryota
(major groups
Excavata
Diaphoretickes
Hacrobia
Cryptista
Rhizaria
Alveolata
Stramenopiles
Plants
Amorphea
Amoebozoa
Opisthokonta
Animals
Fungi
Mesomycetozoea)
Terrabacteria
BV1, BV3, BV5
others
Cyanoprokaryota
  • Cyanobacteriota
  • "Margulisiibacteriota"
    • "Marinamargulisbacteria"
    • "Riflemargulisbacteria"
    • "Saganbacteria"
    • "Termititenacia"
Firmicutes
BV3
Low GC
  • Bacillota
  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • "Thermosediminibacteria"
  • Bacillota D
  • Bacillota E
    • "Sulfobacillia"
    • "Symbiobacteriia"
    • "Thermaerobacteria"
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • "Desulfitobacteriia"
    • "Desulfotomaculia"
    • "Moorellia"
    • "Peptococcia"
    • "Syntrophomonadia"
    • "Thermincolia"
  • "Halanaerobiaeota"
  • "Selenobacteria"
CPR group
Thermotogida
Synergistetes
Thermocalda
Fusobacterida
  • Fusobacteriota
    • Fusobacteriia
  • "Macinerneyibacteriota"
    • "Macinerneyibacteriia"
  • "Muiribacteriota"
    • "Muiribacteriia"
  • "Rifleibacteriota"
    • "Ozemibacteria"
  • "Walliibacteriota"
Hydrobacteria
BV2, BV4
Clade 1
  • "Aerophobota"
    • "Aerophobia"
  • "Auribacterota"
    • "Ancaeobacteria"
    • "Auribacteria"
    • "Erginobacteria"
    • "Tritonobacteria"
  • "Desantisiibacteriota"
  • Elusimicrobiota
    • Elusimicrobiia
    • Endomicrobiia
  • "Firestoneibacteriota"
  • "Goldiibacteriota"
  • "Omnitrophota"
    • "Omnitrophia"
    • "Velamenicoccia"
  • "Ratteibacteriota"
Clade 2
  • "Abyssubacteria"
  • "Hinthialibacterota"
    • "Hinthialibacteria"
  • "Hydrogenedentota"
    • "Hydrogenedentia"
  • "Poribacteriota"
  • "Saltatorellota"
    • "Saltatorellae"
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    • "Sumerlaeia"
Spirochaeto
bacteriobiontes
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    • "Babeliae"
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PVC group
(Planctobacteria)
FCB group
(Sphingobacteria)
Proteobacteria
BV2
Aquificida
  • "Acidulodesulfobacteriota"
    • "Acidulodesulfobacteriia"
  • Aquificota
    • Aquificia
    • "Desulfurobacteriia"
  • Campylobacterota
    • "Campylobacteria"
    • Desulfurellia
  • "Calescibacteriota"
    • "Calescibacteriia"
  • Chrysiogenota
    • Chrysiogenia
  • "Dadaibacteriota"
    • "Dadabacteria"
  • Deferribacterota
    • "Deferribacteria"
  • Desulfobacterota G
    • Syntrophorhabdia
  • "Thermosulfidibacterota"
    • "Thermosulfidibacteria"
Deltaproteobacteria
others
others
  • "Qinglongiota"
    • "Qinglongiia"
  • "Salinosulfoleibacteria"
  • "Teskebacteria"
Taxon identifiers
Acidicapsa
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