Collinsella
Collinsella | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Actinomycetota |
Class: | Coriobacteriia |
Order: | Coriobacteriales |
Family: | Coriobacteriaceae |
Genus: | Collinsella Kageyama, Benno & Nakase 1999[1] |
Type species | |
Collinsella aerofaciens (Eggerth 1935) Kageyama, Benno & Nakase 1999 | |
Species | |
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Collinsella is a genus of Actinomycetota, in the family Coriobacteriaceae.[1][2] Collinsella is named after the microbiologist Matthew D. Collins.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[4]
16S rRNA based LTP_08_2023[5][6][7] | 120 marker proteins based GTDB 08-RS214[8][9][10] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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See also
References
- ^ a b c Parte, A.C. "Collinsella". LPSN.
- ^ Parker, Charles Thomas; Osier, Nicole Danielle; Garrity, George M. "Nomenclature Abstract for Collinsella Kageyama et al. 1999 emend. Kageyama and Benno 2000". The NamesforLife Abstracts. doi:10.1601/nm.5745 (inactive 2024-04-17).
{{cite journal}}
: CS1 maint: DOI inactive as of April 2024 (link) - ^ Kageyama, Akiko; Benno, Yoshimi (2015). "Collinsella". Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd: 1–6. doi:10.1002/9781118960608.gbm00215. ISBN 978-1-118-96060-8.
- ^ Sayers; et al. "Collinsella". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-03-20.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
External links
- https://web.archive.org/web/20051126133139/http://www.bacterio.cict.fr/c/collinsella.html
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- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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