Collinsella

Genus of bacteria

Collinsella
Scientific classification
Domain:
Bacteria
Phylum:
Actinomycetota
Class:
Coriobacteriia
Order:
Coriobacteriales
Family:
Coriobacteriaceae
Genus:
Collinsella

Kageyama, Benno & Nakase 1999[1]
Type species
Collinsella aerofaciens
(Eggerth 1935) Kageyama, Benno & Nakase 1999
Species
  • "C. acetigenes"
  • C. aerofaciens
  • "C. avium"
  • "C. bouchesdurhonensis"
  • C. ihumii
  • C. intestinalis
  • C. massiliensis
  • "C. phocaeensis"
  • "C. provencensis"
  • "Ca. C. stercoripullorum"
  • C. stercoris
  • C. tanakaei
  • "C. urealyticum"
  • C. vaginalis

Collinsella is a genus of Actinomycetota, in the family Coriobacteriaceae.[1][2] Collinsella is named after the microbiologist Matthew D. Collins.[3]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[4]

16S rRNA based LTP_08_2023[5][6][7] 120 marker proteins based GTDB 08-RS214[8][9][10]
Collinsella

C. ihumii

C. massiliensis Padmanabhan et al. 2016

C. tanakaei

C. vaginalis

C. aerofaciens

C. intestinalis

C. stercoris

Collinsella

C. aerofaciens (Eggerth 1935) Kageyama, Benno & Nakase 1999

"C. bouchesdurhonensis" Bilen et al. 2017

C. ihumii Ben Khedher et al. 2022

"Ca. C. stercoripullorum" Gilroy et al. 2021

"C. phocaeensis" Ndongo et al. 2017

C. tanakaei Nagai, Watanabe & Morotomi 2010

C. vaginalis Diop et al. 2019

C. provencensis Dione et al. 2018

C. intestinalis Kageyama & Benno 2000

C. stercoris Kageyama & Benno 2000

See also

References

  1. ^ a b c Parte, A.C. "Collinsella". LPSN.
  2. ^ Parker, Charles Thomas; Osier, Nicole Danielle; Garrity, George M. "Nomenclature Abstract for Collinsella Kageyama et al. 1999 emend. Kageyama and Benno 2000". The NamesforLife Abstracts. doi:10.1601/nm.5745 (inactive 2024-04-17).{{cite journal}}: CS1 maint: DOI inactive as of April 2024 (link)
  3. ^ Kageyama, Akiko; Benno, Yoshimi (2015). "Collinsella". Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd: 1–6. doi:10.1002/9781118960608.gbm00215. ISBN 978-1-118-96060-8.
  4. ^ Sayers; et al. "Collinsella". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-03-20.
  5. ^ "The LTP". Retrieved 20 November 2023.
  6. ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
  7. ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  8. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  9. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  10. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
  • https://web.archive.org/web/20051126133139/http://www.bacterio.cict.fr/c/collinsella.html
Portal:
  • icon Biology
  • v
  • t
  • e
Prokaryotes: Bacteria classification
Domain
Archaea
Bacteria
Eukaryota
(major groups
Excavata
Diaphoretickes
Hacrobia
Cryptista
Rhizaria
Alveolata
Stramenopiles
Plants
Amorphea
Amoebozoa
Opisthokonta
Animals
Fungi
Mesomycetozoea)
Terrabacteria
BV1, BV3, BV5
others
Cyanoprokaryota
  • Cyanobacteriota
  • "Margulisiibacteriota"
    • "Marinamargulisbacteria"
    • "Riflemargulisbacteria"
    • "Saganbacteria"
    • "Termititenacia"
Firmicutes
BV3
Low GC
  • Bacillota
  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • "Thermosediminibacteria"
  • Bacillota D
  • Bacillota E
    • "Sulfobacillia"
    • "Symbiobacteriia"
    • "Thermaerobacteria"
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • "Desulfitobacteriia"
    • "Desulfotomaculia"
    • "Moorellia"
    • "Peptococcia"
    • "Syntrophomonadia"
    • "Thermincolia"
  • "Halanaerobiaeota"
  • "Selenobacteria"
CPR group
Thermotogida
Synergistetes
Thermocalda
Fusobacterida
  • Fusobacteriota
    • Fusobacteriia
  • "Macinerneyibacteriota"
    • "Macinerneyibacteriia"
  • "Muiribacteriota"
    • "Muiribacteriia"
  • "Rifleibacteriota"
    • "Ozemibacteria"
  • "Walliibacteriota"
Hydrobacteria
BV2, BV4
Clade 1
  • "Aerophobota"
    • "Aerophobia"
  • "Auribacterota"
    • "Ancaeobacteria"
    • "Auribacteria"
    • "Erginobacteria"
    • "Tritonobacteria"
  • "Desantisiibacteriota"
  • Elusimicrobiota
    • Elusimicrobiia
    • Endomicrobiia
  • "Firestoneibacteriota"
  • "Goldiibacteriota"
  • "Omnitrophota"
    • "Omnitrophia"
    • "Velamenicoccia"
  • "Ratteibacteriota"
Clade 2
  • "Abyssubacteria"
  • "Hinthialibacterota"
    • "Hinthialibacteria"
  • "Hydrogenedentota"
    • "Hydrogenedentia"
  • "Poribacteriota"
  • "Saltatorellota"
    • "Saltatorellae"
  • "Sumerlaeota"
    • "Sumerlaeia"
Spirochaeto
bacteriobiontes
  • "Babelota"
    • "Babeliae"
  • "Lindowiibacteriota"
  • Spirochaetota
    • "Brevinematia"
    • "Brachyspirae"
    • "Exilispiria"
    • "Leptospiria"
    • "Spirochaetia"
PVC group
(Planctobacteria)
FCB group
(Sphingobacteria)
Proteobacteria
BV2
Aquificida
  • "Acidulodesulfobacteriota"
    • "Acidulodesulfobacteriia"
  • Aquificota
    • Aquificia
    • "Desulfurobacteriia"
  • Campylobacterota
    • "Campylobacteria"
    • Desulfurellia
  • "Calescibacteriota"
    • "Calescibacteriia"
  • Chrysiogenota
    • Chrysiogenia
  • "Dadaibacteriota"
    • "Dadabacteria"
  • Deferribacterota
    • "Deferribacteria"
  • Desulfobacterota G
    • Syntrophorhabdia
  • "Thermosulfidibacterota"
    • "Thermosulfidibacteria"
Deltaproteobacteria
others
others
  • "Qinglongiota"
    • "Qinglongiia"
  • "Salinosulfoleibacteria"
  • "Teskebacteria"
Taxon identifiers
Collinsella
Stub icon

This Actinomycetota-related article is a stub. You can help Wikipedia by expanding it.

  • v
  • t
  • e