Dehalobacter
Dehalobacter | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Bacillota |
Class: | Clostridia |
Order: | Clostridiales |
Family: | Gracilibacteraceae |
Genus: | Dehalobacter Holliger et al. 1998 |
Type species | |
Dehalobacter restrictus Holliger et al. 1998 | |
Species | |
D. restrictus |
Dehalobacter is a genus in the phylum Bacillota (Bacteria).[1]
Etymology
The generic name Dehalobacter derives from Latin de, from; halogenum from Swedish, coined by Swedish chemist Baron Jöns Jakob Berzelius (1779–1848) from Greek hals, halos "salt" + gen "to produce", so called because a salt is formed in reactions involving these elements; a rod bacter, nominally meaning "a rod", but in effect meaning a bacterium, a rod; giving Dehalobacter, a halogen-removing, rod-shaped bacterium.[2]
Species
The genus contains a single species,[2] namely D. restrictus (Holliger et al. 1998), type species of the genus. The specific name is from Latin restrictus, limited, restricted, confined, referring to the limited substrate range used.[3] Recently, Dehalobacter sp. UNSWDHB, which dechlorinate chloroform to dichloromethane, and its reductive dehalogenase were identified.[4][5]
See also
- Bacterial taxonomy
- Microbiology
- List of bacterial orders
- List of bacteria genera
References
- ^ Classification of Genera DL in LPSN; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi:10.1099/ijsem.0.004332.
- ^ a b Dehalobacter in LPSN; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi:10.1099/ijsem.0.004332.
- ^ Holliger, C.; Hahn, D.; Harmsen, H.; Ludwig, W.; Schumacher, W.; Tindall, B.; Vazquez, F.; Weiss, N.; Zehnder, A. J. B. (1998). "Dehalobacter restrictus gen. Nov. And sp. Nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration". Archives of Microbiology. 169 (4): 313–321. doi:10.1007/s002030050577. PMID 9531632. S2CID 28240866.
- ^ Jugder, Bat-Erdene; Ertan, Haluk; Wong, Yie Kuan; Braidy, Nady; Manefield, Michael; Marquis, Christopher P.; Lee, Matthew (2016-08-10). "Genomic, transcriptomic and proteomic analyses ofDehalobacterUNSWDHB in response to chloroform". Environmental Microbiology Reports. 8 (5): 814–824. doi:10.1111/1758-2229.12444. ISSN 1758-2229. PMID 27452500.
- ^ Jugder, Bat-Erdene; Bohl, Susanne; Lebhar, Helene; Healey, Robert D.; Manefield, Mike; Marquis, Christopher P.; Lee, Matthew (2017-06-20). "A bacterial chloroform reductive dehalogenase: purification and biochemical characterization". Microbial Biotechnology. 10 (6): 1640–1648. doi:10.1111/1751-7915.12745. ISSN 1751-7915. PMC 5658581. PMID 28631300.
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- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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