Desulfitobacterium
Genus of bacteria
Desulfitobacterium | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Bacillota |
Class: | Clostridia |
Order: | Clostridiales |
Family: | Desulfitobacteriaceae |
Genus: | Desulfitobacterium Utkin, Woese & Wiegel 1994[1] |
Type species | |
Desulfitobacterium dehalogenans Utkin, Woese & Wiegel 1994 | |
Species | |
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Desulfitobacterium is a genus of Gram-positive, strictly anaerobic, rod-shaped, spore-forming bacteria from the family of Peptococcaceae.[1][2][3] Desulfitobacterium species have low GC-contents.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI)[5]
16S rRNA based LTP_01_2022[6][7][8] | 120 marker proteins based GTDB 07-RS207[9][10][11] | |||||||||||||||||||||||||||
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See also
References
- ^ a b LPSN lpsn.dsmz.de
- ^ UniProt
- ^ a b Stanley, Falkow; Eugene, Rosenberg; Karl-Heinz, Schleifer; Erko, Stackebrandt (2006). Bacteria : Firmicutes, Cyanobacteria (3. ed.). New York, NY: Springer. ISBN 0-387-25494-3.
- ^ J.P. Euzéby. "Desulfitobacterium". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
- ^ Sayers; et al. "Desulfitobacterium". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
- ^ "The LTP". Retrieved 23 February 2022.
- ^ "LTP_all tree in newick format". Archived from the original on 4 September 2022. Retrieved 23 February 2022.
- ^ "LTP_01_2022 Release Notes" (PDF). Retrieved 23 February 2022.
- ^ "GTDB release 07-RS207". Genome Taxonomy Database. Retrieved 20 June 2022.
- ^ "bac120_r207.sp_labels". Genome Taxonomy Database. Retrieved 20 June 2022.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 20 June 2022.
Further reading
- Paul De Vos; et al., eds. (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.
- Granzow, Silke (1998). Isolierung und Charakterisierung eines neuen Tetrachlorethen dechlorierenden strikt anaeroben Bakteriums, Desulfitobacterium frappieri Stamm PCE-S. München: Utz, Wiss. ISBN 3-89675-388-6.
- Neilson, Alasdair H.; Allard, Ann-Sofie (2013). Organic chemicals in the environment mechanisms of degradation and transformation (2nd ed.). Boca Raton: CRC Press. ISBN 978-1-4398-2638-6.
- Hideaki Nojiri; Masataka Tsuda; Masao Fukuda; Yoichi Kamagata, eds. (2014). Biodegradative Bacteria How Bacteria Degrade, Survive, Adapt, and Evolve (Aufl. 2014 ed.). Tokyo: Springer Japan. ISBN 978-4-431-54520-0.
- Stamatelatou, Birgitte K.; Ahring, B. K.; Ahring, I.; Angelidaki, J.; Dolfing, L.; EUegaard, H. N.; Gavala, F.; Haagensen, A. S.; Mogensen, G.; Lyberatos, P. F.; Pind, J. E.; Schmidt, I. V.; Skiadas, K., eds. (2003). Biomethanation II. Berlin, Heidelberg: Springer-Verlag Berlin Heidelberg. ISBN 3-540-45838-7.
- Reineke, Spiros N.; Agathos, Walter, eds. (2002). Biotechnology for the Environment: Strategy and Fundamentals. Dordrecht: Springer Netherlands. ISBN 94-010-0357-2.
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Prokaryotes: Bacteria classification
- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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