Desulfobacter

Genus of bacteria

Desulfobacter
Scientific classification
Domain:
Bacteria
Phylum:
Thermodesulfobacteriota
Class:
Desulfobacteria
Order:
Desulfobacterales
Family:
Desulfobacteraceae
Genus:
Desulfobacter

Widdel 1981[1]
Type species
Desulfobacter postgatei
Widdel 1981
Species
  • D. curvatus
  • D. giganteus
  • D. halotolerans
  • D. hydrogenophilus
  • D. latus
  • D. postgatei
  • "D. psychrotolerans"
  • D. vibrioformis

Desulfobacter is a genus of bacteria from the family of Desulfobacteraceae.[1][2] Desulfobacter has the ability to oxidize acetate to CO2.[3]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI)[5]

16S rRNA based LTP_08_2023[6][7][8] 120 marker proteins based GTDB 08-RS214[9][10][11]
Desulfobacter

D. postgatei Widdel 1981

D. curvatus Widdel 1988

D. halotolerans Brandt & Ingvorsen 1998

D. latus Widdel 1988

D. hydrogenophilus Widdel 1988

D. vibrioformis Lien & Beeder 1997

See also

References

  1. ^ a b "Genus Desulfobacter". LPSN.dsmz.de.
  2. ^ "Taxonomy - Desulfobacter (genus)". UniProt.org.
  3. ^ Sebald, Madaleine, ed. (1993). Genetics and Molecular Biology of Anaerobic Bacteria. New York, NY: Springer New York. ISBN 1-4615-7087-5.
  4. ^ A.C. Parte; et al. "Desulfobacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
  5. ^ Sayers; et al. "Desulfobacter". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
  6. ^ "The LTP". Retrieved 20 November 2023.
  7. ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
  8. ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  9. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  10. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  11. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

Further reading

  • Brenner, Don J.; Krieg, Noel R.; Staley, James T., eds. (2005). Bergey's manual of systematic bacteriology (2nd ed.). New York: Springer. ISBN 0-387-29298-5.
  • Garcia, Jean-Louis; Bruschi, Mireille; Bélaich, Jean-Pierre, eds. (1990). Microbiology and Biochemistry of Strict Anaerobes Involved in Interspecies Hydrogen Transfer. Boston, MA: Springer US. ISBN 1-4613-0613-2.
  • Atlas, Ronald M. (2010). Handbook of microbiological media (4th ed.). Washington, D.C.: Boca Raton, Fla. ISBN 978-1-4398-0408-7.
  • Riding, Robert E.; Awramik, Stanley M. (2000). Microbial sediments. Berlin, Heidelberg: Springer Berlin Heidelberg. ISBN 3-662-04036-0.
  • Thamdrup, Donald E. Canfield ; Erik Kristensen ; Bo (2005). Aquatic geomicrobiology (Transferred to digital print. ed.). London [u.a.]: Elsevier Acad. Press. ISBN 0-12-158340-6.{{cite book}}: CS1 maint: multiple names: authors list (link)
  • Drake, Harold L., ed. (1995). Acetogenesis. Boston, MA: Springer US. ISBN 1-4615-1777-X.
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Prokaryotes: Bacteria classification
Domain
Archaea
Bacteria
Eukaryota
(major groups
Excavata
Diaphoretickes
Hacrobia
Cryptista
Rhizaria
Alveolata
Stramenopiles
Plants
Amorphea
Amoebozoa
Opisthokonta
Animals
Fungi
Mesomycetozoea)
Terrabacteria
BV1, BV3, BV5
others
Cyanoprokaryota
  • Cyanobacteriota
  • "Margulisiibacteriota"
    • "Marinamargulisbacteria"
    • "Riflemargulisbacteria"
    • "Saganbacteria"
    • "Termititenacia"
Firmicutes
BV3
Low GC
  • Bacillota
  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • "Thermosediminibacteria"
  • Bacillota D
  • Bacillota E
    • "Sulfobacillia"
    • "Symbiobacteriia"
    • "Thermaerobacteria"
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • "Desulfitobacteriia"
    • "Desulfotomaculia"
    • "Moorellia"
    • "Peptococcia"
    • "Syntrophomonadia"
    • "Thermincolia"
  • "Halanaerobiaeota"
  • "Selenobacteria"
CPR group
Thermotogida
Synergistetes
Thermocalda
Fusobacterida
  • Fusobacteriota
    • Fusobacteriia
  • "Macinerneyibacteriota"
    • "Macinerneyibacteriia"
  • "Muiribacteriota"
    • "Muiribacteriia"
  • "Rifleibacteriota"
    • "Ozemibacteria"
  • "Walliibacteriota"
Hydrobacteria
BV2, BV4
Clade 1
  • "Aerophobota"
    • "Aerophobia"
  • "Auribacterota"
    • "Ancaeobacteria"
    • "Auribacteria"
    • "Erginobacteria"
    • "Tritonobacteria"
  • "Desantisiibacteriota"
  • Elusimicrobiota
    • Elusimicrobiia
    • Endomicrobiia
  • "Firestoneibacteriota"
  • "Goldiibacteriota"
  • "Omnitrophota"
    • "Omnitrophia"
    • "Velamenicoccia"
  • "Ratteibacteriota"
Clade 2
  • "Abyssubacteria"
  • "Hinthialibacterota"
    • "Hinthialibacteria"
  • "Hydrogenedentota"
    • "Hydrogenedentia"
  • "Poribacteriota"
  • "Saltatorellota"
    • "Saltatorellae"
  • "Sumerlaeota"
    • "Sumerlaeia"
Spirochaeto
bacteriobiontes
  • "Babelota"
    • "Babeliae"
  • "Lindowiibacteriota"
  • Spirochaetota
    • "Brevinematia"
    • "Brachyspirae"
    • "Exilispiria"
    • "Leptospiria"
    • "Spirochaetia"
PVC group
(Planctobacteria)
FCB group
(Sphingobacteria)
Proteobacteria
BV2
Aquificida
  • "Acidulodesulfobacteriota"
    • "Acidulodesulfobacteriia"
  • Aquificota
    • Aquificia
    • "Desulfurobacteriia"
  • Campylobacterota
    • "Campylobacteria"
    • Desulfurellia
  • "Calescibacteriota"
    • "Calescibacteriia"
  • Chrysiogenota
    • Chrysiogenia
  • "Dadaibacteriota"
    • "Dadabacteria"
  • Deferribacterota
    • "Deferribacteria"
  • Desulfobacterota G
    • Syntrophorhabdia
  • "Thermosulfidibacterota"
    • "Thermosulfidibacteria"
Deltaproteobacteria
others
others
  • "Qinglongiota"
    • "Qinglongiia"
  • "Salinosulfoleibacteria"
  • "Teskebacteria"
Taxon identifiers
Desulfobacter
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