Desulfonatronum
Desulfonatronum | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Thermodesulfobacteriota |
Class: | Desulfovibrionia |
Order: | Desulfovibrionales |
Family: | Desulfonatronaceae Waite et al. 2020[1] |
Genus: | Desulfonatronum Pikuta et al. 1998[2] |
Type species | |
Desulfonatronum lacustre Pikuta et al. 1998 | |
Species | |
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Desulfonatronum is a Gram-negative and extremely alkaliphilic bacteria genus from the family of Desulfovibrionaceae.[2][3][4][5]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[6] and National Center for Biotechnology Information (NCBI)[7]
16S rRNA based LTP_08_2023[8][9][10] | 120 marker proteins based GTDB 08-RS214[11][12][13] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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See also
References
- ^ Waite DW, Chuvochina M, Pelikan C, Parks DH, Yilmaz P, Wagner M, Loy A, Naganuma T, Nakai R, Whitman WB, Hahn MW, Kuever J, Hugenholtz P. (2020). "Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major functional capabilities". Int J Syst Evol Microbiol. 70 (11): 5972–6016. doi:10.1099/ijsem.0.004213. PMID 33151140.
- ^ a b "Genus: Desulfonatronum".
- ^ UniProt
- ^ editors, Don J. Brenner, Noel R. Krieg, James T. Staley (2005). Bergey's manual of systematic bacteriology (2nd ed.). New York: Springer. ISBN 0-387-29298-5.
{{cite book}}
:|last1=
has generic name (help)CS1 maint: multiple names: authors list (link) - ^ editors, T. Satyanarayana, Bhavdish Narain Johri, Anil Prakash (2012). Microorganisms in environmental management microbes and environment (2012. ed.). Dordrecht: Springer. ISBN 978-94-007-2229-3.
{{cite book}}
:|last1=
has generic name (help)CS1 maint: multiple names: authors list (link) - ^ J.P. Euzéby. "Desulfonatronum". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
- ^ Sayers; et al. "Desulfonatronum". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
Further reading
- Trubitsyn, D; Geurink, C; Pikuta, E; Lefèvre, CT; McShan, WM; Gillaspy, AF; Bazylinski, DA (31 July 2014). "Draft Genome Sequence of the Obligately Alkaliphilic Sulfate-Reducing Bacterium Desulfonatronum thiodismutans Strain MLF1". Genome Announcements. 2 (4). doi:10.1128/genomeA.00741-14. PMC 4118063. PMID 25081260.
- editors, Don J. Brenner, Noel R. Krieg, James T. Staley (2005). Bergey's manual of systematic bacteriology (2nd ed.). New York: Springer. ISBN 0-387-29298-5.
{{cite book}}
:|last1=
has generic name (help)CS1 maint: multiple names: authors list (link) - Atlas, Ronald M. (2010). Handbook of microbiological media (4th ed.). Washington, D.C.: Boca Raton, Fla. ISBN 978-1-4398-0408-7.
- Seckbach, Joseph, ed. (2000). Journey to Diverse Microbial Worlds Adaptation to Exotic Environments. Dordrecht: Springer Netherlands. ISBN 94-011-4269-6.
- (ed.), Koki Horikoshi (2011). Extremophiles handbook. Tokyo: Springer. ISBN 978-4-431-53897-4.
{{cite book}}
:|last1=
has generic name (help)
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- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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