FAM50A

Protein-coding gene in the species Homo sapiens
FAM50A
Identifiers
AliasesFAM50A, 9F, DXS9928E, HXC-26, HXC26, XAP5, family with sequence similarity 50 member A, MRXSA
External IDsOMIM: 300453; MGI: 1351626; HomoloGene: 3448; GeneCards: FAM50A; OMA:FAM50A - orthologs
Gene location (Human)
X chromosome (human)
Chr.X chromosome (human)[1]
X chromosome (human)
Genomic location for FAM50A
Genomic location for FAM50A
BandXq28Start154,444,141 bp[1]
End154,450,654 bp[1]
Gene location (Mouse)
X chromosome (mouse)
Chr.X chromosome (mouse)[2]
X chromosome (mouse)
Genomic location for FAM50A
Genomic location for FAM50A
BandX|X A7.3Start73,356,639 bp[2]
End73,363,755 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sural nerve

  • anterior pituitary

  • stromal cell of endometrium

  • tendon of biceps brachii

  • C1 segment

  • right lobe of thyroid gland

  • left lobe of thyroid gland

  • apex of heart

  • right hemisphere of cerebellum

  • muscle layer of sigmoid colon
Top expressed in
  • saccule

  • otic placode

  • otic vesicle

  • primary oocyte

  • neural layer of retina

  • zygote

  • endocardial cushion

  • morula

  • morula

  • granulocyte
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • RNA binding
Cellular component
  • nucleus
  • nucleoplasm
Biological process
  • spermatogenesis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9130

108160

Ensembl

ENSG00000071859

ENSMUSG00000001962

UniProt

Q14320

Q9WV03

RefSeq (mRNA)

NM_004699

NM_138607

RefSeq (protein)

NP_004690

NP_613073

Location (UCSC)Chr X: 154.44 – 154.45 MbChr X: 73.36 – 73.36 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Protein FAM50A is a protein that in humans is encoded by the FAM50A gene.[5][6][7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000071859 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000001962 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Mazzarella R, Pengue G, Yoon J, Jones J, Schlessinger D (Nov 1997). "Differential expression of XAP5, a candidate disease gene". Genomics. 45 (1): 216–9. doi:10.1006/geno.1997.4912. PMID 9339379.
  6. ^ Toyoda A, Sakai T, Sugiyama Y, Kusuda J, Hashimoto K, Maeda H (May 1997). "Isolation and analysis of a novel gene, HXC-26, adjacent to the rab GDP dissociation inhibitor gene located at human chromosome Xq28 region". DNA Res. 3 (5): 337–40. doi:10.1093/dnares/3.5.337. PMID 9039504.
  7. ^ "Entrez Gene: FAM50A family with sequence similarity 50, member A".

Further reading

  • Chen EY, Zollo M, Mazzarella R, et al. (1997). "Long-range sequence analysis in Xq28: thirteen known and six candidate genes in 219.4 kb of high GC DNA between the RCP/GCP and G6PD loci". Hum. Mol. Genet. 5 (5): 659–68. doi:10.1093/hmg/5.5.659. PMID 8733135.
  • Sedlacek Z, Münstermann E, Dhorne-Pollet S, et al. (1999). "Human and mouse XAP-5 and XAP-5-like (X5L) genes: identification of an ancient functional retroposon differentially expressed in testis". Genomics. 61 (2): 125–32. doi:10.1006/geno.1999.5931. PMID 10534398.
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Ross MT, Grafham DV, Coffey AJ, et al. (2005). "The DNA sequence of the human X chromosome". Nature. 434 (7031): 325–37. Bibcode:2005Natur.434..325R. doi:10.1038/nature03440. PMC 2665286. PMID 15772651.
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.


  • v
  • t
  • e