Mycobacteriales
Mycobacteriales | |
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Corynebacterium ulcerans colonies on a blood agar plate | |
Scientific classification ![]() | |
Domain: | Bacteria |
Phylum: | Actinomycetota |
Class: | Actinomycetia |
Order: | Mycobacteriales Janke 1924 (Approved Lists 1980)[1] |
Type genus | |
Mycobacterium Lehmann and Neumann 1896 (Approved Lists 1980) | |
Families[2] | |
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Synonyms | |
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The Mycobacteriales are an order of bacteria.[1] The current description is genome-based, per Gupta 2019 emendation. Most members produce mycolic acids.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN).[2]
Whole-genome based phylogeny[4] | 16S rRNA based LTP_08_2023[5][6][7] | 120 marker proteins based GTDB 08-RS214[8][9][10] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Terminology
Mycolata has been used as a non-taxonomic term for mycolic acid-containing Actinobacteria. Mycobacteriales includes all such species, but it also includes some without mycolic acid, making these two terms imperfect, paraphyletic, aliases.[11]
See also
References
- ^ a b Janke A. (1924). Allgemeine technische Mikrobiologie. I. Teil. Die Mikroorganismen [General Technical Microbiology. Part I. The Microorganisms.] (1st ed.). Dresden and Leipzig: T. Steinkopf.
- ^ a b Euzéby JP, Parte AC. "Mycobacteriales". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 7, 2021.
- ^ Gupta, Radhey S. (22 February 2019). "Commentary: Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Frontiers in Microbiology. 10. doi:10.3389/fmicb.2019.00206. PMC 6395429.
Mycolic acids are important constituents of the cell envelopes of most members.
- ^ Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ Chun, J; Kang, S-O; Hah, Y C; Goodfellow, M (September 1996). "Phylogeny of mycolic acid-containing actinomycetes". Journal of Industrial Microbiology & Biotechnology. 17 (3–4): 205–213. doi:10.1007/BF01574694.
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- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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