Opitutaceae
Opitutaceae | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Verrucomicrobiota |
Class: | Opitutae |
Order: | Opitutales |
Family: | Opitutaceae Choo et al. 2007 |
Species[1] | |
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The Opitutaceae are a Gram-negative and chemoheterotrophic order of the domain Bacteria.[2][3][4] Opitutaceae bacteria were isolated from soil and coastal marine springs.[4]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[5]
16S rRNA based LTP_01_2022[6][7][8] | 120 marker proteins based GTDB 07-RS207[9][10][11] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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See also
References
- ^ "Opitutaceae". www.uniprot.org.
- ^ a b J.P. Euzéby. "Opitutaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
- ^ Parker, Charles Thomas; Garrity, George M. (2015). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomy of the order Opitutales Choo et al. 2007". doi:10.1601/tx.14028 (inactive 2024-04-17).
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(help)CS1 maint: DOI inactive as of April 2024 (link) - ^ a b Parte, Aidan; Krieg, Noel R.; Ludwig, Wolfgang; Whitman, William B.; Hedlund, Brian P.; Paster, Bruce J.; Staley, James T.; Ward, Naomi; Brown, Daniel (4 February 2011). Bergey's Manual of Systematic Bacteriology: Volume 4: The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes. Springer Science & Business Media. p. 820. ISBN 978-0-387-68572-4.
- ^ Sayers; et al. "Opitutaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
- ^ "The LTP". Retrieved 23 February 2022.
- ^ "LTP_all tree in newick format". Retrieved 23 February 2022.
- ^ "LTP_01_2022 Release Notes" (PDF). Retrieved 23 February 2022.
- ^ "GTDB release 07-RS207". Genome Taxonomy Database. Retrieved 20 June 2022.
- ^ "bac120_r207.sp_labels". Genome Taxonomy Database. Retrieved 20 June 2022.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 20 June 2022.
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- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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