Opitutaceae

Family of bacteria

Opitutaceae
Scientific classification
Domain:
Bacteria
Phylum:
Verrucomicrobiota
Class:
Opitutae
Order:
Opitutales
Family:
Opitutaceae

Choo et al. 2007
Species[1]
  • "Ca. Didemniditutus"
  • Cephaloticoccus
  • Ereboglobus
  • Geminisphaera
  • Horticoccus
  • "Lacunisphaera"
  • Nibricoccus
  • Oleiharenicola
  • Opitutus
  • Rariglobus
  • "Ca. Synoicihabitans"

The Opitutaceae are a Gram-negative and chemoheterotrophic order of the domain Bacteria.[2][3][4] Opitutaceae bacteria were isolated from soil and coastal marine springs.[4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[5]

16S rRNA based LTP_01_2022[6][7][8] 120 marker proteins based GTDB 07-RS207[9][10][11]

Oleiharenicola Rochman et al. 2018

Pelagicoccus Yoon et al. 2007

"Ca. Didemniditutus" corrig. Lopera et al. 2017

"Lacunisphaera" Rast et al. 2017

Opitutus Chin, Liesack & Janssen 2001

Cephaloticoccus Lin et al. 2016

Ereboglobus Tegtmeier et al. 2018

Nibricoccus Baek et al. 2019

Geminisphaera Wertz et al. 2017

Rariglobus Pitt et al. 2020

"Ca. Synoicihabitans" Murray et al. 2021

See also

References

  1. ^ "Opitutaceae". www.uniprot.org.
  2. ^ a b J.P. Euzéby. "Opitutaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
  3. ^ Parker, Charles Thomas; Garrity, George M. (2015). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomy of the order Opitutales Choo et al. 2007". doi:10.1601/tx.14028 (inactive 2024-04-17). {{cite journal}}: Cite journal requires |journal= (help)CS1 maint: DOI inactive as of April 2024 (link)
  4. ^ a b Parte, Aidan; Krieg, Noel R.; Ludwig, Wolfgang; Whitman, William B.; Hedlund, Brian P.; Paster, Bruce J.; Staley, James T.; Ward, Naomi; Brown, Daniel (4 February 2011). Bergey's Manual of Systematic Bacteriology: Volume 4: The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes. Springer Science & Business Media. p. 820. ISBN 978-0-387-68572-4.
  5. ^ Sayers; et al. "Opitutaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
  6. ^ "The LTP". Retrieved 23 February 2022.
  7. ^ "LTP_all tree in newick format". Retrieved 23 February 2022.
  8. ^ "LTP_01_2022 Release Notes" (PDF). Retrieved 23 February 2022.
  9. ^ "GTDB release 07-RS207". Genome Taxonomy Database. Retrieved 20 June 2022.
  10. ^ "bac120_r207.sp_labels". Genome Taxonomy Database. Retrieved 20 June 2022.
  11. ^ "Taxon History". Genome Taxonomy Database. Retrieved 20 June 2022.
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Prokaryotes: Bacteria classification
Domain
Archaea
Bacteria
Eukaryota
(major groups
Excavata
Diaphoretickes
Hacrobia
Cryptista
Rhizaria
Alveolata
Stramenopiles
Plants
Amorphea
Amoebozoa
Opisthokonta
Animals
Fungi
Mesomycetozoea)
Terrabacteria
BV1, BV3, BV5
others
Cyanoprokaryota
  • Cyanobacteriota
  • "Margulisiibacteriota"
    • "Marinamargulisbacteria"
    • "Riflemargulisbacteria"
    • "Saganbacteria"
    • "Termititenacia"
Firmicutes
BV3
Low GC
  • Bacillota
  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • "Thermosediminibacteria"
  • Bacillota D
  • Bacillota E
    • "Sulfobacillia"
    • "Symbiobacteriia"
    • "Thermaerobacteria"
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • "Desulfitobacteriia"
    • "Desulfotomaculia"
    • "Moorellia"
    • "Peptococcia"
    • "Syntrophomonadia"
    • "Thermincolia"
  • "Halanaerobiaeota"
  • "Selenobacteria"
CPR group
Thermotogida
Synergistetes
Thermocalda
Fusobacterida
  • Fusobacteriota
    • Fusobacteriia
  • "Macinerneyibacteriota"
    • "Macinerneyibacteriia"
  • "Muiribacteriota"
    • "Muiribacteriia"
  • "Rifleibacteriota"
    • "Ozemibacteria"
  • "Walliibacteriota"
Hydrobacteria
BV2, BV4
Clade 1
  • "Aerophobota"
    • "Aerophobia"
  • "Auribacterota"
    • "Ancaeobacteria"
    • "Auribacteria"
    • "Erginobacteria"
    • "Tritonobacteria"
  • "Desantisiibacteriota"
  • Elusimicrobiota
    • Elusimicrobiia
    • Endomicrobiia
  • "Firestoneibacteriota"
  • "Goldiibacteriota"
  • "Omnitrophota"
    • "Omnitrophia"
    • "Velamenicoccia"
  • "Ratteibacteriota"
Clade 2
  • "Abyssubacteria"
  • "Hinthialibacterota"
    • "Hinthialibacteria"
  • "Hydrogenedentota"
    • "Hydrogenedentia"
  • "Poribacteriota"
  • "Saltatorellota"
    • "Saltatorellae"
  • "Sumerlaeota"
    • "Sumerlaeia"
Spirochaeto
bacteriobiontes
  • "Babelota"
    • "Babeliae"
  • "Lindowiibacteriota"
  • Spirochaetota
    • "Brevinematia"
    • "Brachyspirae"
    • "Exilispiria"
    • "Leptospiria"
    • "Spirochaetia"
PVC group
(Planctobacteria)
FCB group
(Sphingobacteria)
Proteobacteria
BV2
Aquificida
  • "Acidulodesulfobacteriota"
    • "Acidulodesulfobacteriia"
  • Aquificota
    • Aquificia
    • "Desulfurobacteriia"
  • Campylobacterota
    • "Campylobacteria"
    • Desulfurellia
  • "Calescibacteriota"
    • "Calescibacteriia"
  • Chrysiogenota
    • Chrysiogenia
  • "Dadaibacteriota"
    • "Dadabacteria"
  • Deferribacterota
    • "Deferribacteria"
  • Desulfobacterota G
    • Syntrophorhabdia
  • "Thermosulfidibacterota"
    • "Thermosulfidibacteria"
Deltaproteobacteria
others
others
  • "Qinglongiota"
    • "Qinglongiia"
  • "Salinosulfoleibacteria"
  • "Teskebacteria"
Taxon identifiers
Opitutaceae
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