Planifilum
Genus of bacteria
Planifilum | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Bacillota |
Class: | Bacilli |
Order: | Bacillales |
Family: | Thermoactinomycetaceae |
Genus: | Planifilum Hatayama et al. 2005[1] |
Type species | |
Planifilum fimeticola Hatayama et al. 2005 | |
Species | |
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Planifilum is a Gram-positive and aerobic bacterial genus from the family of Thermoactinomycetaceae.[1][2][3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[4]
16S rRNA based LTP_08_2023[5][6][7] | 120 marker proteins based GTDB 08-RS214[8][9][10] | ||||||||||||||||||||||||
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See also
References
- ^ a b c J.P. Euzéby. "Planifilum". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 20 March 2022.
- ^ "Planifilum". www.uniprot.org.
- ^ Goodfellow, Michael; Jones, Amanda L. (1 January 2015). "Planifilum". Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. doi:10.1002/9781118960608.gbm00572.
- ^ Sayers; et al. "Planifilum". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 20 March 2022.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
Further reading
- Zhang, Y.-x.; Dong, C.; Biao, S. (1 August 2007). "Planifilum yunnanense sp. nov., a thermophilic thermoactinomycete isolated from a hot spring". International Journal of Systematic and Evolutionary Microbiology. 57 (8): 1851–1854. doi:10.1099/ijs.0.64646-0. PMID 17684270.
- Yu, Zhen; Wu, Chu; Yang, Gui-Qin; Zhou, Shun-Gui (21 September 2014). "Planifilum caeni sp. nov., A Novel Member of Thermoactinomycete Isolated from Sludge Compost". Current Microbiology. 70 (1): 135–140. doi:10.1007/s00284-014-0693-6. ISSN 0343-8651.
- Hatayama, K. (1 September 2005). "Planifilum fimeticola gen. nov., sp. nov. and Planifilum fulgidum sp. nov., novel members of the family 'Thermoactinomycetaceae' isolated from compost". International Journal of Systematic and Evolutionary Microbiology. 55 (5): 2101–2104. doi:10.1099/ijs.0.63367-0.
- Tulasi, Satyanarayana; Jennifer, Littlechild; Yutaka, Kawarabayasi (2013). Thermophilic microbes in environmental and industrial biotechnology biotechnology of thermophiles (2nd ed.). Dordrecht: Springer. ISBN 94-007-5899-5.
- Paul, De Vos (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 0-387-68489-1.
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Prokaryotes: Bacteria classification
- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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