ROBO3

Protein-coding gene in the species Homo sapiens
ROBO3
Identifiers
AliasesROBO3, HGPPS, HGPS, RBIG1, RIG1, roundabout guidance receptor 3, HGPPS1
External IDsOMIM: 608630; MGI: 1343102; HomoloGene: 32119; GeneCards: ROBO3; OMA:ROBO3 - orthologs
Gene location (Human)
Chromosome 11 (human)
Chr.Chromosome 11 (human)[1]
Chromosome 11 (human)
Genomic location for ROBO3
Genomic location for ROBO3
Band11q24.2Start124,865,432 bp[1]
End124,881,471 bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for ROBO3
Genomic location for ROBO3
Band9|9 A4Start37,326,965 bp[2]
End37,344,542 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right uterine tube

  • left ovary

  • right ovary

  • vena cava

  • sural nerve

  • left uterine tube

  • amygdala

  • right frontal lobe

  • tendon of biceps brachii

  • C1 segment
Top expressed in
  • gray matter layer of cerebellum

  • superior frontal gyrus

  • primary visual cortex

  • nerve fascicle

  • rhombic lip

  • habenula

  • outer nuclear layer

  • embryo

  • inner nuclear layer

  • secondary oocyte
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein binding
  • cell-cell adhesion mediator activity
Cellular component
  • integral component of membrane
  • axon
  • membrane
  • plasma membrane
Biological process
  • multicellular organism development
  • chemotaxis
  • cell differentiation
  • axon midline choice point recognition
  • Roundabout signaling pathway
  • nervous system development
  • axon guidance
  • homophilic cell adhesion via plasma membrane adhesion molecules
  • chemoattraction of axon
  • dendrite self-avoidance
  • commissural neuron axon guidance
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

64221

19649

Ensembl

ENSG00000154134

ENSMUSG00000032128

UniProt

Q96MS0

Q9Z2I4

RefSeq (mRNA)

NM_022370

NM_001164767
NM_011248

RefSeq (protein)
NP_071765
NP_001357285
NP_001357286
NP_001357287
NP_001357288

NP_001357290
NP_001357293
NP_001357295

n/a

Location (UCSC)Chr 11: 124.87 – 124.88 MbChr 9: 37.33 – 37.34 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Roundabout homolog 3 is a protein that in humans is encoded by the ROBO3 gene.[5][6]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000154134 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000032128 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Jen JC, Chan WM, Bosley TM, Wan J, Carr JR, Rub U, Shattuck D, Salamon G, Kudo LC, Ou J, Lin DD, Salih MA, Kansu T, Al Dhalaan H, Al Zayed Z, MacDonald DB, Stigsby B, Plaitakis A, Dretakis EK, Gottlob I, Pieh C, Traboulsi EI, Wang Q, Wang L, Andrews C, Yamada K, Demer JL, Karim S, Alger JR, Geschwind DH, Deller T, Sicotte NL, Nelson SF, Baloh RW, Engle EC (Jun 2004). "Mutations in a human ROBO gene disrupt hindbrain axon pathway crossing and morphogenesis". Science. 304 (5676): 1509–13. Bibcode:2004Sci...304.1509J. doi:10.1126/science.1096437. PMC 1618874. PMID 15105459.
  6. ^ "Entrez Gene: ROBO3 roundabout, axon guidance receptor, homolog 3 (Drosophila)".

Further reading

  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Yuan SS, Cox LA, Dasika GK, Lee EY (1999). "Cloning and functional studies of a novel gene aberrantly expressed in RB-deficient embryos". Dev. Biol. 207 (1): 62–75. doi:10.1006/dbio.1998.9141. PMID 10049565.
  • Jen J, Coulin CJ, Bosley TM, et al. (2002). "Familial horizontal gaze palsy with progressive scoliosis maps to chromosome 11q23-25". Neurology. 59 (3): 432–5. doi:10.1212/wnl.59.3.432. PMID 12177379. S2CID 32947142.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Bosley TM, Salih MA, Jen JC, et al. (2006). "Neurologic features of horizontal gaze palsy and progressive scoliosis with mutations in ROBO3". Neurology. 64 (7): 1196–203. doi:10.1212/01.WNL.0000156349.01765.2B. PMID 15824346. S2CID 72500917.
  • Camurri L, Mambetisaeva E, Davies D, et al. (2006). "Evidence for the existence of two Robo3 isoforms with divergent biochemical properties". Mol. Cell. Neurosci. 30 (4): 485–93. doi:10.1016/j.mcn.2005.07.014. PMID 16226035. S2CID 41242127.
  • Chan WM, Traboulsi EI, Arthur B, et al. (2006). "Horizontal gaze palsy with progressive scoliosis can result from compound heterozygous mutations in ROBO3". J. Med. Genet. 43 (3): e11. doi:10.1136/jmg.2005.035436. PMC 2563249. PMID 16525029.


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