Spirochaeta
Spirochaeta | |
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A microscopic photograph of fluorescent-stained Spirochaeta americana | |
Scientific classification | |
Domain: | Bacteria |
Phylum: | Spirochaetota |
Class: | Spirochaetia |
Order: | Spirochaetales |
Family: | Spirochaetaceae |
Genus: | Spirochaeta Ehrenberg 1835 non Turczaninow 1851 |
Type species | |
Spirochaeta plicatilis Ehrenberg 1835 | |
Species | |
See text | |
Synonyms | |
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Spirochaeta is a genus of bacteria classified within the phylum Spirochaetota.[1][2]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [1] and National Center for Biotechnology Information (NCBI).[2]
16S rRNA based LTP_08_2023[3][4][5] | 120 single copy marker proteins based GTDB 08-RS214[6][7][8] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Species incertae sedis:
- Spirochaeta plicatilis Ehrenberg 1835 (type sp.)
- "Spirochaeta taiwanensis" Chi-Yu & Cai-Ji 2004
- Spirochaeta xylanolyticus Yeh & Huang 2004
See also
References
- ^ a b J.P. Euzéby. "Spirochaeta". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-07-20.
- ^ a b Sayers; et al. "Spirochaeta". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-07-20.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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