Syntrophomonadaceae

Family of bacteria

Syntrophomonadaceae
Scientific classification
Domain:
Bacteria
Phylum:
Bacillota
Class:
Clostridia
Order:
Eubacteriales
Family:
Syntrophomonadaceae

Zhao et al. 1993[1][2][3]
Genera
  • Pelospora
  • "Ca. Syntrophobaca"
  • "Ca. Syntrophocurvum"
  • "Ca. Syntropholuna"
  • Syntrophomonas
  • "Ca. Syntrophonatronum"
  • Syntrophothermus
  • Thermohydrogenium
  • Thermosyntropha

The Syntrophomonadaceae are a family of anaerobic bacteria in the order of Clostridiales.[1][3][4] As a source of energy, these organisms uses carboxylic acids.[4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[5]

16S rRNA based LTP_08_2023[6][7][8] 120 marker proteins based GTDB 08-RS214[9][10][11]
Syntrophomonadaceae

Syntrophothermus

Thermosyntropha

Syntrophomonas [incl. Pelospora]

"Syntrophomonadales"
"Syntrophothermaceae"

Syntrophothermus

Syntrophomonadaceae

See also

References

  1. ^ a b UniProt
  2. ^ a b A.C. Parte; et al. "Syntrophomonadaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
  3. ^ a b eol
  4. ^ a b Sobieraj, Martin; Boone, David R. (1 January 2006). "Syntrophomonadaceae". The Prokaryotes. Springer US: 1041–1049. doi:10.1007/0-387-30744-3_37.
  5. ^ Sayers; et al. "Syntrophomonadaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
  6. ^ "The LTP". Retrieved 20 November 2023.
  7. ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
  8. ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  9. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  10. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  11. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

Further reading

  • Liu, P.; Qiu, Q.; Lu, Y. (1 April 2011). "Syntrophomonadaceae-Affiliated Species as Active Butyrate-Utilizing Syntrophs in Paddy Field Soil". Applied and Environmental Microbiology. 77 (11): 3884–3887. doi:10.1128/AEM.00190-11. PMC 3127591. PMID 21460111.
  • Paul, De Vos (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 0-387-68489-1.
  • Ahring (2003). Birgitte K. (ed.). Biomethanation. Berlin [etc.]: Springer. ISBN 3-540-45839-5.
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Prokaryotes: Bacteria classification
Domain
Archaea
Bacteria
Eukaryota
(major groups
Excavata
Diaphoretickes
Hacrobia
Cryptista
Rhizaria
Alveolata
Stramenopiles
Plants
Amorphea
Amoebozoa
Opisthokonta
Animals
Fungi
Mesomycetozoea)
Terrabacteria
BV1, BV3, BV5
others
Cyanoprokaryota
  • Cyanobacteriota
  • "Margulisiibacteriota"
    • "Marinamargulisbacteria"
    • "Riflemargulisbacteria"
    • "Saganbacteria"
    • "Termititenacia"
Firmicutes
BV3
Low GC
  • Bacillota
  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • "Thermosediminibacteria"
  • Bacillota D
  • Bacillota E
    • "Sulfobacillia"
    • "Symbiobacteriia"
    • "Thermaerobacteria"
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • "Desulfitobacteriia"
    • "Desulfotomaculia"
    • "Moorellia"
    • "Peptococcia"
    • "Syntrophomonadia"
    • "Thermincolia"
  • "Halanaerobiaeota"
  • "Selenobacteria"
CPR group
Thermotogida
Synergistetes
Thermocalda
Fusobacterida
  • Fusobacteriota
    • Fusobacteriia
  • "Macinerneyibacteriota"
    • "Macinerneyibacteriia"
  • "Muiribacteriota"
    • "Muiribacteriia"
  • "Rifleibacteriota"
    • "Ozemibacteria"
  • "Walliibacteriota"
Hydrobacteria
BV2, BV4
Clade 1
  • "Aerophobota"
    • "Aerophobia"
  • "Auribacterota"
    • "Ancaeobacteria"
    • "Auribacteria"
    • "Erginobacteria"
    • "Tritonobacteria"
  • "Desantisiibacteriota"
  • Elusimicrobiota
    • Elusimicrobiia
    • Endomicrobiia
  • "Firestoneibacteriota"
  • "Goldiibacteriota"
  • "Omnitrophota"
    • "Omnitrophia"
    • "Velamenicoccia"
  • "Ratteibacteriota"
Clade 2
  • "Abyssubacteria"
  • "Hinthialibacterota"
    • "Hinthialibacteria"
  • "Hydrogenedentota"
    • "Hydrogenedentia"
  • "Poribacteriota"
  • "Saltatorellota"
    • "Saltatorellae"
  • "Sumerlaeota"
    • "Sumerlaeia"
Spirochaeto
bacteriobiontes
  • "Babelota"
    • "Babeliae"
  • "Lindowiibacteriota"
  • Spirochaetota
    • "Brevinematia"
    • "Brachyspirae"
    • "Exilispiria"
    • "Leptospiria"
    • "Spirochaetia"
PVC group
(Planctobacteria)
FCB group
(Sphingobacteria)
Proteobacteria
BV2
Aquificida
  • "Acidulodesulfobacteriota"
    • "Acidulodesulfobacteriia"
  • Aquificota
    • Aquificia
    • "Desulfurobacteriia"
  • Campylobacterota
    • "Campylobacteria"
    • Desulfurellia
  • "Calescibacteriota"
    • "Calescibacteriia"
  • Chrysiogenota
    • Chrysiogenia
  • "Dadaibacteriota"
    • "Dadabacteria"
  • Deferribacterota
    • "Deferribacteria"
  • Desulfobacterota G
    • Syntrophorhabdia
  • "Thermosulfidibacterota"
    • "Thermosulfidibacteria"
Deltaproteobacteria
others
others
  • "Qinglongiota"
    • "Qinglongiia"
  • "Salinosulfoleibacteria"
  • "Teskebacteria"
Taxon identifiers
Syntrophomonadaceae


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