TRIM9 |
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![](//upload.wikimedia.org/wikipedia/commons/thumb/2/27/Protein_TRIM9_PDB_2db8.png/250px-Protein_TRIM9_PDB_2db8.png) |
Available structures |
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PDB | Ortholog search: PDBe RCSB |
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Identifiers |
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Aliases | TRIM9, RNF91, SPRING, tripartite motif containing 9 |
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External IDs | OMIM: 606555; MGI: 2137354; HomoloGene: 9045; GeneCards: TRIM9; OMA:TRIM9 - orthologs |
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Gene location (Human) |
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![Chromosome 14 (human)](//upload.wikimedia.org/wikipedia/commons/thumb/7/78/Ideogram_human_chromosome_14.svg/300px-Ideogram_human_chromosome_14.svg.png) | Chr. | Chromosome 14 (human)[1] |
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| Band | 14q22.1 | Start | 50,975,262 bp[1] |
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End | 51,096,061 bp[1] |
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Gene location (Mouse) |
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![Chromosome 12 (mouse)](//upload.wikimedia.org/wikipedia/commons/thumb/c/ca/Ideogram_house_mouse_chromosome_12.svg/260px-Ideogram_house_mouse_chromosome_12.svg.png) | Chr. | Chromosome 12 (mouse)[2] |
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| Band | 12|12 C2 | Start | 70,291,307 bp[2] |
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End | 70,394,388 bp[2] |
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RNA expression pattern |
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Bgee | Human | Mouse (ortholog) |
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Top expressed in | - right hemisphere of cerebellum
- right frontal lobe
- Brodmann area 23
- primary visual cortex
- Brodmann area 9
- Region I of hippocampus proper
- middle temporal gyrus
- ventricular zone
- nucleus accumbens
- caudate nucleus
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| Top expressed in | - piriform cortex
- lateral septal nucleus
- Rostral migratory stream
- primary motor cortex
- superior frontal gyrus
- subiculum
- primary visual cortex
- anterior amygdaloid area
- olfactory tubercle
- medial dorsal nucleus
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| More reference expression data |
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BioGPS | ![](//upload.wikimedia.org/wikipedia/commons/thumb/8/83/PBB_GE_TRIM9_209859_at_fs.png/250px-PBB_GE_TRIM9_209859_at_fs.png) | More reference expression data |
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Gene ontology |
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Molecular function | - metal ion binding
- zinc ion binding
- protein binding
- protein homodimerization activity
- transferase activity
- protein domain specific binding
- ubiquitin-protein transferase activity
- SNARE binding
| Cellular component | - cytoplasm
- cytoplasmic vesicle
- cell junction
- dendrite
- cell projection
- synapse
- cytoskeleton
- synaptic vesicle
- intracellular anatomical structure
- cytosol
- presynaptic cytosol
| Biological process | - negative regulation of calcium ion-dependent exocytosis
- protein ubiquitination
- negative regulation of SNARE complex assembly
- synaptic vesicle exocytosis
- proteasome-mediated ubiquitin-dependent protein catabolic process
| Sources:Amigo / QuickGO |
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Orthologs |
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Species | Human | Mouse |
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Entrez | | |
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Ensembl | | |
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UniProt | | |
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RefSeq (mRNA) | | NM_001110202 NM_001110203 NM_001286386 NM_001286387 NM_001286388
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NM_053167 |
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RefSeq (protein) | | NP_001103672 NP_001103673 NP_001273315 NP_001273316 NP_001273317
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NP_444397 NP_001392290 NP_001392291 NP_001392292 NP_001392293 NP_001392294 NP_001392295 NP_001392296 NP_001392297 NP_001392298 NP_001392299 NP_001392300 NP_001392301 NP_001392302 NP_001392303 NP_001392304 NP_001392305 NP_001392306 NP_001392307 NP_001392308 NP_001392309 NP_001392310 NP_001392311 NP_001392312 NP_001392313 NP_001392314 NP_001392315 NP_001392316 |
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Location (UCSC) | Chr 14: 50.98 – 51.1 Mb | Chr 12: 70.29 – 70.39 Mb |
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PubMed search | [3] | [4] |
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Wikidata |
View/Edit Human | View/Edit Mouse |
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