TTC37

Protein-coding gene in the species Homo sapiens
TTC37
Identifiers
AliasesTTC37, KIAA0372, Ski3, THES, tetratricopeptide repeat domain 37
External IDsOMIM: 614589; MGI: 2679923; HomoloGene: 40966; GeneCards: TTC37; OMA:TTC37 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for TTC37
Genomic location for TTC37
Band5q15Start95,461,755 bp[1]
End95,554,977 bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for TTC37
Genomic location for TTC37
Band13|13 C1Start76,246,853 bp[2]
End76,338,435 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • stromal cell of endometrium

  • skin of thigh

  • right hemisphere of cerebellum

  • skin of hip

  • germinal epithelium

  • epithelium of colon

  • biceps brachii

  • body of pancreas

  • skin of abdomen
Top expressed in
  • zygote

  • secondary oocyte

  • hand

  • primary oocyte

  • cumulus cell

  • spermatid

  • otolith organ

  • utricle

  • lacrimal gland

  • internal carotid artery
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
Cellular component
  • Ski complex
  • nucleoplasm
  • nucleus
  • cytoplasm
  • cytosol
Biological process
  • exonucleolytic catabolism of deadenylated mRNA
  • RNA catabolic process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9652

218343

Ensembl

ENSG00000198677

ENSMUSG00000033991

UniProt

Q6PGP7

F8VPK0

RefSeq (mRNA)

NM_014639

NM_001081352

RefSeq (protein)

NP_055454

NP_001074821

Location (UCSC)Chr 5: 95.46 – 95.55 MbChr 13: 76.25 – 76.34 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

TTC37 (Tetratricopeptide repeat domain 37) is a protein which in humans is encoded by gene TTC37, located on chromosome 5. [5][6]

Structure

The length of the polypeptide chain is 1,564 amino acids, and the molecular weight is 175,486 Da.[6] TTC37 contains six tetratricopeptide repeat domains.[6]

Function

TTC37 is a component of the Ski complex which is involved in exosome mediated RNA decay.[7]

Subcellular distribution

It is localized in the cytoplasmatic space and the cell nucleus.[5]

Clinical significance

Mutation in the TTC37 gene are associated with tricho-hepato-enteric syndrome.[8][9]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000198677 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000033991 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "HUGO Gene Nomenclature Committee, HGNC:23639". Archived from the original on 2017-09-16. Retrieved 2017-09-18.
  6. ^ a b c "UniProt, Q6PGP7". Retrieved 2017-09-18.
  7. ^ Kögel A, Keidel A, Bonneau F, Schäfer IB, Conti E (February 2022). "The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism". Molecular Cell. 82 (4): 756–769.e8. doi:10.1016/j.molcel.2022.01.009. PMC 8860381. PMID 35120588.
  8. ^ Poulton C, Pathak G, Mina K, Lassman T, Azmanov DN, McCormack E, et al. (May 2019). "Tricho-hepatic-enteric syndrome (THES) without intractable diarrhoea". Gene. 699: 110–114. doi:10.1016/j.gene.2019.02.059. PMC 7872052. PMID 30844479.
  9. ^ Bourgeois P, Esteve C, Chaix C, Béroud C, Lévy N, Fabre A, Badens C (June 2018). "Tricho-Hepato-Enteric Syndrome mutation update: Mutations spectrum of TTC37 and SKIV2L, clinical analysis and future prospects". Human Mutation. 39 (6): 774–789. doi:10.1002/humu.23418. PMID 29527791. S2CID 4331400.
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