UBASH3A

Protein-coding gene in the species Homo sapiens
UBASH3A
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2CRN

Identifiers
AliasesUBASH3A, CLIP4, STS-2, TULA, TULA-1, ubiquitin associated and SH3 domain containing A
External IDsOMIM: 605736; MGI: 1926074; HomoloGene: 56833; GeneCards: UBASH3A; OMA:UBASH3A - orthologs
Gene location (Human)
Chromosome 21 (human)
Chr.Chromosome 21 (human)[1]
Chromosome 21 (human)
Genomic location for UBASH3A
Genomic location for UBASH3A
Band21q22.3Start42,403,447 bp[1]
End42,447,684 bp[1]
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)[2]
Chromosome 17 (mouse)
Genomic location for UBASH3A
Genomic location for UBASH3A
Band17|17 A3.3- B1Start31,426,847 bp[2]
End31,465,866 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • granulocyte

  • blood

  • lymph node

  • testicle

  • thymus

  • spleen

  • appendix

  • gallbladder

  • rectum

  • tonsil
Top expressed in
  • thymus

  • mesenteric lymph nodes

  • granulocyte

  • blood

  • embryo

  • yolk sac

  • parasympathetic nervous system

  • thyroid gland

  • pharynx

  • tongue
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • phosphatase activity
Cellular component
  • cytoplasm
  • cytosol
  • extracellular exosome
  • nucleus
  • nucleoplasm
  • Golgi apparatus
Biological process
  • regulation of cytokine production
  • negative regulation of T cell receptor signaling pathway
  • negative regulation of signal transduction
  • dephosphorylation
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

53347

328795

Ensembl

ENSG00000160185

ENSMUSG00000042345

UniProt

P57075

Q3V3E1

RefSeq (mRNA)

NM_001001895
NM_001243467
NM_018961

NM_177823

RefSeq (protein)

NP_001001895
NP_001230396
NP_061834

NP_808491

Location (UCSC)Chr 21: 42.4 – 42.45 MbChr 17: 31.43 – 31.47 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Ubiquitin-associated and SH3 domain-containing protein A is a protein that in humans is encoded by the UBASH3A gene.[5][6]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000160185 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000042345 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Wattenhofer M, Shibuya K, Kudoh J, Lyle R, Michaud J, Rossier C, Kawasaki K, Asakawa S, Minoshima S, Berry A, Bonne-Tamir B, Shimizu N, Antonarakis SE, Scott HS (Apr 2001). "Isolation and characterization of the UBASH3A gene on 21q22.3 encoding a potential nuclear protein with a novel combination of domains". Hum Genet. 108 (2): 140–7. doi:10.1007/s004390000453. PMID 11281453. S2CID 22719211.
  6. ^ "Entrez Gene: UBASH3A ubiquitin associated and SH3 domain containing, A".

Further reading

  • Smirnova EV, Collingwood TS, Bisbal C, et al. (2008). "TULA proteins bind to ABCE-1, a host factor of HIV-1 assembly, and inhibit HIV-1 biogenesis in a UBA-dependent fashion". Virology. 372 (1): 10–23. doi:10.1016/j.virol.2007.10.012. PMID 18006034.
  • Collingwood TS, Smirnova EV, Bogush M, et al. (2007). "T-cell ubiquitin ligand affects cell death through a functional interaction with apoptosis-inducing factor, a key factor of caspase-independent apoptosis". J. Biol. Chem. 282 (42): 30920–8. doi:10.1074/jbc.M706870200. PMID 17709377.
  • Bertelsen V, Breen K, Sandvig K, et al. (2007). "The Cbl-interacting protein TULA inhibits dynamin-dependent endocytosis". Exp. Cell Res. 313 (8): 1696–709. doi:10.1016/j.yexcr.2007.02.017. hdl:10852/28097. PMID 17382318.
  • Hu YH, Warnatz HJ, Vanhecke D, et al. (2006). "Cell array-based intracellular localization screening reveals novel functional features of human chromosome 21 proteins". BMC Genomics. 7: 155. doi:10.1186/1471-2164-7-155. PMC 1526728. PMID 16780588.
  • Hoeller D, Crosetto N, Blagoev B, et al. (2006). "Regulation of ubiquitin-binding proteins by monoubiquitination". Nat. Cell Biol. 8 (2): 163–9. doi:10.1038/ncb1354. PMID 16429130. S2CID 1324257.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Kowanetz K, Crosetto N, Haglund K, et al. (2004). "Suppressors of T-cell receptor signaling Sts-1 and Sts-2 bind to Cbl and inhibit endocytosis of receptor tyrosine kinases". J. Biol. Chem. 279 (31): 32786–95. doi:10.1074/jbc.M403759200. PMID 15159412.
  • Feshchenko EA, Smirnova EV, Swaminathan G, et al. (2004). "TULA: an SH3- and UBA-containing protein that binds to c-Cbl and ubiquitin". Oncogene. 23 (27): 4690–706. doi:10.1038/sj.onc.1207627. PMID 15107835. S2CID 34698870.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • v
  • t
  • e
  • 2crn: Solution structure of the UBA domain of human UBASH3A protein
    2crn: Solution structure of the UBA domain of human UBASH3A protein


Stub icon

This article on a gene on human chromosome 21 is a stub. You can help Wikipedia by expanding it.

  • v
  • t
  • e