PSME4

Protein found in humans
PSME4
Identifiers
AliasesPSME4, PA200, proteasome activator subunit 4
External IDsOMIM: 607705; MGI: 2143994; HomoloGene: 113742; GeneCards: PSME4; OMA:PSME4 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for PSME4
Genomic location for PSME4
Band2p16.2Start53,864,069 bp[1]
End53,970,993 bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for PSME4
Genomic location for PSME4
Band11|11 A4Start30,721,726 bp[2]
End30,830,361 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sperm

  • glutes

  • gastrocnemius muscle

  • left testis

  • biceps brachii

  • right testis

  • Skeletal muscle tissue of biceps brachii

  • deltoid muscle

  • triceps brachii muscle

  • vastus lateralis muscle
Top expressed in
  • temporal muscle

  • triceps brachii muscle

  • vastus lateralis muscle

  • sternocleidomastoid muscle

  • digastric muscle

  • myocardium of ventricle

  • gastrocnemius muscle

  • spermatid

  • medial head of gastrocnemius muscle

  • cardiac muscles
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • protein binding
  • peptidase activator activity
  • lysine-acetylated histone binding
  • proteasome binding
Cellular component
  • cytoplasm
  • nuclear speck
  • proteasome complex
  • nucleus
  • nucleoplasm
  • cytosol
  • proteasome core complex
  • spermatoproteasome complex
Biological process
  • cell differentiation
  • regulation of cellular amino acid metabolic process
  • antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
  • regulation of mRNA stability
  • positive regulation of canonical Wnt signaling pathway
  • protein polyubiquitination
  • stimulatory C-type lectin receptor signaling pathway
  • tumor necrosis factor-mediated signaling pathway
  • MAPK cascade
  • cellular response to DNA damage stimulus
  • positive regulation of peptidase activity
  • multicellular organism development
  • Fc-epsilon receptor signaling pathway
  • NIK/NF-kappaB signaling
  • spermatogenesis
  • anaphase-promoting complex-dependent catabolic process
  • T cell receptor signaling pathway
  • negative regulation of canonical Wnt signaling pathway
  • DNA repair
  • proteasome-mediated ubiquitin-dependent protein catabolic process
  • Wnt signaling pathway, planar cell polarity pathway
  • proteasomal ubiquitin-independent protein catabolic process
  • negative regulation of G2/M transition of mitotic cell cycle
  • protein deubiquitination
  • SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
  • transmembrane transport
  • regulation of transcription from RNA polymerase II promoter in response to hypoxia
  • post-translational protein modification
  • regulation of hematopoietic stem cell differentiation
  • interleukin-1-mediated signaling pathway
  • regulation of mitotic cell cycle phase transition
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23198

103554

Ensembl

ENSG00000068878

ENSMUSG00000040850

UniProt

Q14997

Q5SSW2

RefSeq (mRNA)

NM_014614

NM_134013

RefSeq (protein)

NP_055429

NP_598774

Location (UCSC)Chr 2: 53.86 – 53.97 MbChr 11: 30.72 – 30.83 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Proteasome activator complex subunit 4 is a protein that in humans is encoded by the PSME4 gene.[5][6][7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000068878 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000040850 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Nomura N, Nagase T, Miyajima N, Sazuka T, Tanaka A, Sato S, Seki N, Kawarabayasi Y, Ishikawa K, Tabata S (Dec 1995). "Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1". DNA Research. 1 (5): 223–9. doi:10.1093/dnares/1.5.223. PMID 7584044.
  6. ^ Ustrell V, Hoffman L, Pratt G, Rechsteiner M (Jul 2002). "PA200, a nuclear proteasome activator involved in DNA repair". The EMBO Journal. 21 (13): 3516–25. doi:10.1093/emboj/cdf333. PMC 126083. PMID 12093752.
  7. ^ "Entrez Gene: PSME4 proteasome (prosome, macropain) activator subunit 4".

Further reading

  • Goff SP (Aug 2003). "Death by deamination: a novel host restriction system for HIV-1". Cell. 114 (3): 281–3. doi:10.1016/S0092-8674(03)00602-0. PMID 12914693. S2CID 16340355.
  • Seeger M, Ferrell K, Frank R, Dubiel W (Mar 1997). "HIV-1 tat inhibits the 20 S proteasome and its 11 S regulator-mediated activation". The Journal of Biological Chemistry. 272 (13): 8145–8. doi:10.1074/jbc.272.13.8145. PMID 9079628.
  • Madani N, Kabat D (Dec 1998). "An endogenous inhibitor of human immunodeficiency virus in human lymphocytes is overcome by the viral Vif protein". Journal of Virology. 72 (12): 10251–5. doi:10.1128/JVI.72.12.10251-10255.1998. PMC 110608. PMID 9811770.
  • Simon JH, Gaddis NC, Fouchier RA, Malim MH (Dec 1998). "Evidence for a newly discovered cellular anti-HIV-1 phenotype". Nature Medicine. 4 (12): 1397–400. doi:10.1038/3987. PMID 9846577. S2CID 25235070.
  • Mulder LC, Muesing MA (Sep 2000). "Degradation of HIV-1 integrase by the N-end rule pathway". The Journal of Biological Chemistry. 275 (38): 29749–53. doi:10.1074/jbc.M004670200. PMID 10893419.
  • Sheehy AM, Gaddis NC, Choi JD, Malim MH (Aug 2002). "Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein". Nature. 418 (6898): 646–50. Bibcode:2002Natur.418..646S. doi:10.1038/nature00939. PMID 12167863. S2CID 4403228.
  • Huang X, Seifert U, Salzmann U, Henklein P, Preissner R, Henke W, Sijts AJ, Kloetzel PM, Dubiel W (Nov 2002). "The RTP site shared by the HIV-1 Tat protein and the 11S regulator subunit alpha is crucial for their effects on proteasome function including antigen processing". Journal of Molecular Biology. 323 (4): 771–82. doi:10.1016/S0022-2836(02)00998-1. PMID 12419264.
  • Gaddis NC, Chertova E, Sheehy AM, Henderson LE, Malim MH (May 2003). "Comprehensive investigation of the molecular defect in vif-deficient human immunodeficiency virus type 1 virions". Journal of Virology. 77 (10): 5810–20. doi:10.1128/JVI.77.10.5810-5820.2003. PMC 154025. PMID 12719574.
  • Lecossier D, Bouchonnet F, Clavel F, Hance AJ (May 2003). "Hypermutation of HIV-1 DNA in the absence of the Vif protein". Science. 300 (5622): 1112. doi:10.1126/science.1083338. PMID 12750511. S2CID 20591673.
  • Zhang H, Yang B, Pomerantz RJ, Zhang C, Arunachalam SC, Gao L (Jul 2003). "The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA". Nature. 424 (6944): 94–8. Bibcode:2003Natur.424...94Z. doi:10.1038/nature01707. PMC 1350966. PMID 12808465.
  • Mangeat B, Turelli P, Caron G, Friedli M, Perrin L, Trono D (Jul 2003). "Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts". Nature. 424 (6944): 99–103. Bibcode:2003Natur.424...99M. doi:10.1038/nature01709. PMID 12808466. S2CID 4347374.
  • Harris RS, Bishop KN, Sheehy AM, Craig HM, Petersen-Mahrt SK, Watt IN, Neuberger MS, Malim MH (Jun 2003). "DNA deamination mediates innate immunity to retroviral infection". Cell. 113 (6): 803–9. doi:10.1016/S0092-8674(03)00423-9. PMID 12809610. S2CID 544971.
  • Harris RS, Sheehy AM, Craig HM, Malim MH, Neuberger MS (Jul 2003). "DNA deamination: not just a trigger for antibody diversification but also a mechanism for defense against retroviruses". Nature Immunology. 4 (7): 641–3. doi:10.1038/ni0703-641. PMID 12830140. S2CID 5549252.
  • Gu Y, Sundquist WI (Jul 2003). "Good to CU". Nature. 424 (6944): 21–2. Bibcode:2003Natur.424...21G. doi:10.1038/424021a. PMID 12840737. S2CID 4430569.
  • Mariani R, Chen D, Schröfelbauer B, Navarro F, König R, Bollman B, Münk C, Nymark-McMahon H, Landau NR (Jul 2003). "Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif". Cell. 114 (1): 21–31. doi:10.1016/S0092-8674(03)00515-4. PMID 12859895. S2CID 1789911.
  • KewalRamani VN, Coffin JM (Aug 2003). "Virology. Weapons of mutational destruction". Science. 301 (5635): 923–5. doi:10.1126/science.1088965. PMID 12920286. S2CID 82480782.
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A (alpha subunits)B (beta subunits)C (ATPases)D (non-ATPases)E (activator subunits)
F (inhibitor subunit)
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