Spirochaetales
Spirochaetales | |
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A microscopic photograph of fluorescent-stained Spirochaeta americana | |
Scientific classification | |
Domain: | Bacteria |
Phylum: | Spirochaetota |
Class: | Spirochaetia |
Order: | Spirochaetales Buchanan 1917[1] (Approved Lists 1980)[2] |
Families | |
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The Spirochaetales are an order of spirochete bacteria. Some species within this order are known to causes syphilis, Lyme disease, relapsing fever, and other illnesses.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [4] and National Center for Biotechnology Information (NCBI).[5]
16S rRNA based LTP_08_2023[6][7][8] | 120 single copy marker proteins based GTDB 08-RS214[9][10][11] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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References
- ^ Buchanan RE. (1917). "Studies in the Nomenclature and Classification of the Bacteria: II. The Primary Subdivisions of the Schizomycetes". J Bacteriol. 2 (2): 155–164. doi:10.1128/jb.2.2.155-164.1917. PMC 378699. PMID 16558735.
- ^ Skerman VBD, McGowan V, Sneath PHA. (1980). "Approved lists of bacterial names". Int J Syst Bacteriol. 30: 225–420. doi:10.1099/00207713-30-1-225.
- ^ Karami, Ali; Sarshar, Meysam; Ranjbar, Reza; Zanjani, Rahim Sorouri (19 October 2014). "The Phylum Spirochaetaceae". The Prokaryotes. pp. 915–929. doi:10.1007/978-3-642-38954-2_156. ISBN 978-3-642-38953-5.
- ^ J.P. Euzéby. "Spirochaetales". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-07-20.
- ^ Sayers; et al. "Spirochaetales". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-07-20.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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- Domain
- Archaea
- Bacteria
- Eukaryota
- (major groups
- Excavata
- Diaphoretickes
- Hacrobia
- Cryptista
- Rhizaria
- Alveolata
- Stramenopiles
- Plants
- Hacrobia
- Amorphea
- Amoebozoa
- Opisthokonta
- Animals
- Fungi
- Mesomycetozoea)
BV1, BV3, BV5
others |
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Cyanoprokaryota |
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Firmicutes BV3 Low GC |
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- "Elulota"
- "Elulimicrobia"
- "Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"
Synergistetes |
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Thermocalda |
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- Fusobacteriota
- Fusobacteriia
- "Macinerneyibacteriota"
- "Macinerneyibacteriia"
- "Muiribacteriota"
- "Muiribacteriia"
- "Rifleibacteriota"
- "Ozemibacteria"
- "Walliibacteriota"
BV2, BV4
Clade 1 |
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Clade 2 |
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Spirochaeto bacteriobiontes |
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PVC group (Planctobacteria) |
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FCB group (Sphingobacteria) |
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Proteobacteria BV2 |
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- "Qinglongiota"
- "Qinglongiia"
- "Salinosulfoleibacteria"
- "Teskebacteria"
- Source: Bergey's Manual (2001–2012)
- Alternative views: Wikispecies
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